PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004494908.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 205aa    MW: 22517.8 Da    PI: 4.6322
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004494908.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-182877255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  XP_004494908.1 28 LYRGVRRRN-SGKWVSEIREPK----KpNRIWLGTFPTPEMAAIAYDVAALALKG 77
                    69****888.8*********94....468***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381234.2E-231199IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000183.89E-322787No hitNo description
PfamPF008474.2E-112777IPR001471AP2/ERF domain
SuperFamilySSF541716.34E-212886IPR016177DNA-binding domain
SMARTSM003809.9E-352891IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-302887IPR001471AP2/ERF domain
PROSITE profilePS5103222.7212885IPR001471AP2/ERF domain
PRINTSPR003673.6E-112940IPR001471AP2/ERF domain
PRINTSPR003673.6E-116787IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MPENYTADHA SSSSSSSSTK VSTGRHPLYR GVRRRNSGKW VSEIREPKKP NRIWLGTFPT  60
PEMAAIAYDV AALALKGKNA ELNFPNSSSS LPVPASSSAR DIQLAAASAA AAVGAAKDAL  120
ATEGNHAVEL QDFFSSGNEN NNNNNNINEF IDEDLIFDMP NVLVNMAEGM LISPPRFDHF  180
ETDYHYDVQE NMCDDPNLWS YPYFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-152285163ATERF1
3gcc_A6e-152285163ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004494908.11e-151PREDICTED: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR08e-60ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLI1NAK06e-82I1NAK0_SOYBN; Uncharacterized protein
STRINGGLYMA19G37670.12e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.16e-40ERF family protein